Products & Services Technologies Imaging Mass Cytometry IMC Trending Topics and Publications

IMC Trending Topics and Publications

You want to get the most out of your precious samples, to answer complex questions through deep interrogation and analysis of relevant data, to understand the role of spatial biology in health and disease and to publish and showcase your research results.


The Power of IMC                               

Learn how Imaging Mass Cytometry™ (IMC™) is used as a vital spatial biology tool.

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IMC Trending Topics                  

IMC Trending Topics articles, toolboxnews and FAS Favorite feature the great work performed by IMC users.

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IMC Publications and Posters

Find current IMC bibliographies and posters, read the new FAS Favorite in publications, view charts that demonstrate the published use of IMC.  

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The Power of IMC

  • ­­Subcellular resolution: allows accurate and quantifiable phenotyping and cell function assessment

  • No autofluorescence: reliable results when working with highly autofluorescent tissues like lung, gut, brain and skin

  • No time-consuming cyclic protocols: high-plex protein detection from formalin-fixed, paraffin-embedded or frozen tissue sections

  • Proven: hundreds of hands-on users and more than 130 peer-review published references




Click Phenotype, Stratify and Discover to view each of these value application areas.

IMC Trending Topics Toolbox

Recommended resources grouped to provide you with knowledge, ideas and tips on selected topics.

IMC cell segmentation ESCH Epimods

Robust cell segmentation is essential for high-multiplex image analysis. Here are some resources to address key cell segmentation challenges. They also help if you are unfamiliar with the general why and how of cell segmentation. Included is information about the IMC Cell Segmentation Kit, which facilitates an end-to-end workflow for single-cell data analytics and is an important first step to improving high-multiplex cell segmentation regardless of which pipeline is used. 

Staining for tissue imaging on the Hyperion™ Imaging System is similar to standard immunohistochemistry techniques in terms of tissue collection, tissue processing and the staining itself. Optimized staining is important in order to carry out extensive characterization of the tissue microenvironment. There are numerous examples of panels of up to 40 markers described for formalin-fixed, paraffin-embedded (FFPE) human tumor sections, and a protocol for frozen tissue sections is also available.  

Featured NEWS

IMC Trending Topics News

Check this feature regularly to see a current selection of exciting news and stories about researchers who are using IMC to make an impact.



  • Thank you to Thomas Ashhurst, PhD, for presenting his work at this month’s CYTO® 2022 workshop – Integration and Analysis of High-Dimensional Single-Cell Cytometry and Imaging Data in a Murine Model of Viral Encephalitis.
  • Adriano Luca Martinelli and Maria Anna Rapsomaniki at IBM Research Europe in Zurich introduced a new computational framework, ATHENA, that facilitates the visualization, processing and analysis of tumor heterogeneity from spatial omics measurements, including from Imaging Mass Cytometry.


  • Melissa B. Davis participated in a National Breast Cancer Coalition panel discussion on healthcare disparities in the US and how to facilitate change in the movement toward health equity for all. She was also interviewed for the broadcast news story, “Racial and ethnic disparities in breast cancer outcomes,” which appeared on NY1 News on May 4.
  • Thanks to Anne Bärenwaldt at University of Bern and Inselspital who collaborated with us for a great Helios™ and Hyperion Imaging System kickoff in May! What a great Imaging Mass Cytometry community in Switzerland.
  • Congratulations to Tobias Boettler and team at the University of Freiburg for their April publication exploring the pathophysiology of known cases of liver inflammation following SARS-CoV-2 infection or vaccination. The study used Imaging Mass Cytometry for spatial immune profiling of liver biopsy tissue.
  • Thank you to the Abu Dhabi Stem Cells Center for their time training with the team of Antonio Bencomo-Hernandez on the Hyperion Imaging System. We can't wait to see the results from this amazing team on stem cell therapy research!
  • Kudos to the Newcastle University Flow Cytometry Core Facility, which supported a new publication by Jack Leslie, Derek Mann and team with some nice data on the Hyperion Imaging System describing how manipulation of neutrophils assists immunotherapy for liver cancer.

FAS Favorite

Check in regularly to see a featured publication recommendation from one of our expert FAS team members.



Wendell Smith


Wendell Smith, Senior Field Applications Scientist: Proteomics, recommends a Frontiers in Immunology publication by N. Ung et al., “Adaptation of Imaging Mass Cytometry to explore the single cell alloimmune landscape of liver transplant rejection.”  

Principal Investigator: Juliet Emamaullee, MD, PhD, FRCSC, FACS, attending physician and assistant professor of clinical surgery from the surgery department at Keck School of Medicine of USC.

Why Wendell recommends this publication: “I like this paper because it highlights our technology in a new area for Standard BioTools concerning our IMC platform: organ transplant rejection. This is an area of extreme importance both clinically and scientifically. The publication specifically utilizes our IMC technology to investigate the alloimmune microenvironment at a single-cell resolution during clinical rejection episodes.

What is also interesting about this paper is it was the first publication that I am aware of that utilized a set IMC panel that I helped design for the Children’s Hospital Los Angeles (CHLA) imaging core. The authors used this panel to characterize the immune landscape of chronic rejection (CR) in clinical tissue samples obtained from liver transplant recipients. This demonstrates how well a validated panel can work if cores choose to establish an appropriately validated panel.”

IMC Publications

Join the hundreds of researchers gaining deep spatial insights using Imaging Mass Cytometry.

Get the complete IMC bibliography now, with over 130 peer-reviewed publications.

See more than 130 Publications

More than 50 publications highlight the use of high-plex imaging by IMC to investigate the spatial biology of the complex tumor microenvironment and its role in furthering cancer and immuno-oncology research.


IMC Posters 

Learn more technical details about IMC by viewing some of our recently presented posters.


As of December 31, 2021, there are 138 total peer-reviewed publications for IMC, with 63 from 2021, more than double the number added in 2020.

Immuno-oncology and cancer were the leading category with 37% of IMC publications in this research area. In addition to IMC being used in a wide range of applications, significant work has been done to develop methods and data analysis approaches.

Unless explicitly and expressly stated otherwise, all products are provided for Research Use Only, not for use in diagnostic procedures. Find more information here.